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Press Release
Is the shape of a genome as important as its content?


Thanks to The Wistar Institute for this article.

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Nikkilina
Washington University School of Medicine
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Fri, Oct 29, 2010, 6:26 pm CDT

I've never really thought about the shape of the genome, but I can see how that would make a big difference.


JanedeLartigue
UC Davis
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Sat, Oct 30, 2010, 1:19 am CDT

This is really interesting, here's a link to the paper if anyone is interested in reading more http://nar.oxfordjournals.org/content/early/2010/10/27/nar.gkq955.abstract. I particularly like the technique they used, if they could apply it to human cells, I wonder if they could sort of create a kind of in vivo microarray, look at whether genes are upregulated or downregulated under different conditions.  Very cool anyway!


Why am I doing this again?
Washington University
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Sun, Oct 31, 2010, 12:18 am CDT

What a wonderful article!  You know, the 3-D confirmation of proteins have always been shown to be one of the most important aspects of its function.  It is hard to believe that this idea had never been extrapolated to the human genome!


Why am I doing this again?
Washington University
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Sun, Oct 31, 2010, 12:20 am CDT

NMR studies in particular have really demonstrated how the distance between amino acids on opposite sides of a protein determine its substrate specificity and affinity.


Will
UC Davis
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Sun, Oct 31, 2010, 1:35 am CDT

Not sure that this will provide the same kind of insight as protein structure biology.  Proteins require to be in their quarternary structure to function, therefore understanding the way it folds is the key to understanding the role of the protein.  This is not the case for the genome.


JanedeLartigue
UC Davis
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Sun, Oct 31, 2010, 2:35 am CDT

Not necessarily though, isn't that kind of the point of the article, that in fact the shape of the genome might be just as important, maybe their are genomic structures we haven't elucidated yet.

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