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A coming of age for PacBio and long read sequencing? #AGBT13
Saturday, February 23, 2013
Next Generation Sequencing rapidly moves from the bench to the bedside #AGBT13
Friday, February 22, 2013
#AGBT day one talks and observations: WES/WGS, kissing snails, Poo bacteria sequencing
Wednesday, February 20, 2013
Got fetal DNA on the brain?
Friday, September 28, 2012
Memes about 'junk DNA' miss the mark on paradigm shifting science
Friday, September 7, 2012
So, you've dropped a cryovial or lost a sample box in your liquid nitrogen container...now what?
Thursday, August 16, 2012
Some math...Or why posting the median salary of genders in the White House doesn't help Republicans
Monday, April 16, 2012
A peril of "Open" science: Premature reporting on the death of #ArsenicLife
Thursday, February 2, 2012
YouTube: Just a (PhD) Dream
Thursday, October 27, 2011
Slides - From the Bench to the Blogosphere: Why every lab should be writing a science blog
Wednesday, October 19, 2011
Fact Checking AARP: Why soundbytes about shrimp on treadmills and pickle technology are misleading
Monday, October 17, 2011
MHV68: Mouse herpes, not mouth herpes, but just as important
Monday, October 17, 2011
@DonorsChoose update: Pictures of the materials we bought being used!!
Friday, October 14, 2011
@DonorsChoose project: Launch a Rocket of Success
Wednesday, October 5, 2011
Is this supposed to be a feature, @NPGnews ?
Tuesday, October 4, 2011
A dose of batshit crazy: Bachmann would drill in the everglades if elected president
Monday, August 29, 2011
A true day in lab
Wednesday, August 10, 2011
A day in the lab...
Monday, August 8, 2011
University of Iowa holds Science Writing Symposium
Tuesday, April 26, 2011
Sonication success??
Monday, April 18, 2011
Thwart the NYtimes paywall
Thursday, March 17, 2011
Circle of life
Thursday, March 17, 2011
Curing a plague: Cryptocaryon irritans
Wednesday, March 9, 2011
Video: First new fish in 6 months!!
Wednesday, March 2, 2011
The first step is the most important
Thursday, December 30, 2010
Have we really found a stem cell cure for HIV?
Wednesday, December 15, 2010
This paper saved my graduate career
Tuesday, December 14, 2010
Valium or Sex: How do you like your science promotion
Tuesday, November 23, 2010
A wedding pic.
Tuesday, November 16, 2010
To rule by terror
Tuesday, November 9, 2010
Summary Feed: What I would be doing if I wasn't doing science
Wednesday, October 6, 2010
"You have more Hobbies than anyone I know"
Tuesday, October 5, 2010
Hiccupping Hubris
Wednesday, September 22, 2010
A death in the family :(
Monday, September 20, 2010
The new lab fish!
Friday, September 10, 2010
What I wish I knew...Before applying to graduate school
Tuesday, September 7, 2010
Stopping viruses by targeting human proteins
Tuesday, September 7, 2010
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Brian Krueger, PhD
Duke University
Durham NC USA
Brian Krueger is the owner, creator and coder of LabSpaces by night and Next Generation Sequencer by day. In his blog you will find articles about technology, molecular biology, and editorial comments on the current state of science on the internet.
My posts are presented as opinion and commentary and do not represent the views of LabSpaces Productions, LLC, my employer, or my educational institution.
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Here's a true timelapse video of a day in lab. Pictures were taken every minute for 24 hrs. The video goes from about 4am to 4am the next day.
And because someone asked...The images were taken with a GoProHD Hero camera and then compiled in Windows Live MovieMaker. Images are displayed for 0.1 seconds.
This post has been viewed: 784 time(s)
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What's the organism in the bottom middle of the aquarium? It seems fairly active, but completely immotile (<--- can't think of the proper term).
It's an anemone. It moves because there's a really high water flow in the tank (2,400 gph). I think the snails are the coolest thing to watch in that video!
Did people know they were being recorded? Would be mighty embarrassing if someone were working late, thought they were alone, and, um........ :-)
Haha! Yes, I told them all :) You can see that Curtis came in around 3am. He works two jobs, 8 hrs in my lab and then 8 hrs in the hospital clinical lab.
Haha, I covered our EH&S guidelines concerning eating in lab in my last post. The Desk area is considered food safe.
Hi Brian, I am certainly interested in both continuity and accuracy of PacBio sequencing. However, I no longer fear the 15% error rate like I first did, because we have more-or-less worked . . .Read More
Great stuff Jeremy! You bring up good points about gaps and bioinformatics. Despite the advances in technology, there is a lot of extra work that goes into assembling a de novo genome on the ba. . .Read More
Brian,I don't know why shatz doesn't appear to be concerned about the accuracy of Pacbio for plant applications. You would have to ask him. We operate in different spaces- shatz is concerned a. . .Read More
Hey Jeremy, thanks for the clarification! I really enjoyed your talk and seeing Moleculo in action. I just wish we knew more details about how it worked. One question though, why do you think. . .Read More
Hey Brian- good post, I don't like Moleculo because they do the work (i dont have problem reconstructing sub assemblies of millions of reads:) although many people do appreciate the ease of data colle. . .Read More