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December (3)

The first step is the most important
Thursday, December 30, 2010

Have we really found a stem cell cure for HIV?
Wednesday, December 15, 2010

This paper saved my graduate career
Tuesday, December 14, 2010
November (3)

Valium or Sex: How do you like your science promotion
Tuesday, November 23, 2010

A wedding pic.
Tuesday, November 16, 2010

To rule by terror
Tuesday, November 9, 2010
October (2)September (5)

Hiccupping Hubris
Wednesday, September 22, 2010

A death in the family :(
Monday, September 20, 2010

The new lab fish!
Friday, September 10, 2010

What I wish I knew...Before applying to graduate school
Tuesday, September 7, 2010

Stopping viruses by targeting human proteins
Tuesday, September 7, 2010
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Brian Krueger, PhD
Columbia University Medical Center
New York NY USA

Brian Krueger is the owner, creator and coder of LabSpaces by night and Next Generation Sequencer by day. He is currently the Director of Genomic Analysis and Technical Operations for the Institute for Genomic Medicine at Columbia University Medical Center. In his blog you will find articles about technology, molecular biology, and editorial comments on the current state of science on the internet.

My posts are presented as opinion and commentary and do not represent the views of LabSpaces Productions, LLC, my employer, or my educational institution.

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Recent Comments

Jaeson, that's not true at most places.  Top tier, sure, but 1100+ should get you past the first filter of most PhD programs in the sciences. . . .Read More
Jun 24, 2013, 8:39am

All I can say is that GRE's really do matter at the University of California....I had amazing grades, as well as a Master's degree with stellar grades, government scholarships, publication, confere. . .Read More
Jun 19, 2013, 11:00pm

Hi Brian, I am certainly interested in both continuity and accuracy of PacBio sequencing. However, I no longer fear the 15% error rate like I first did, because we have more-or-less worked . . .Read More
Feb 26, 2013, 12:13am

Great stuff Jeremy!  You bring up good points about gaps and bioinformatics.  Despite the advances in technology, there is a lot of extra work that goes into assembling a de novo genome on the ba. . .Read More
Feb 25, 2013, 10:20am

Brian,I don't know why shatz doesn't appear to be concerned about the accuracy of Pacbio for plant applications. You would have to ask him. We operate in different spaces- shatz is concerned a. . .Read More
Feb 25, 2013, 8:01am
Friday, September 10, 2010

This is kind of stupid, but I thought I'd share a video of my new lab fish. Who knows if they'll survive quarantine, but we can bask in their beauty for a while.

The blue-ish one is a powder blue tang approximately 3" long and the yellow one is one of my favorite fish of all time! It's a yellow long nose butterfly fish. The tang is covered in a pretty common parasite so they have to stay in quarantine for a few weeks. The treatment regimen is to lower the salinity by 70% and then let the fish hang out in that for 4 weeks. Amazingly, saltwater fish can survive in very low salinity water, the parasite can't and eventually dies out as all of the eggs hatch. Although, the unfortunate thing is that salinity can be reduce drastically over a one hour period, but the salinity must be raised back up to normal much much more slowly. It usually takes a week and a half to bring the quarantine tank's salinity back up without killing the fish. I'm sure there's some interesting physiology involved there ;) So maybe in 6 weeks I'll post another video of these guys swimming in the main tank!

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Blog Comments

Mod Scientist
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gorgeous!!!! I want!!!

Disgruntled Julie
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I think you should set up a webcam stream of your fish tank, so I can watch them whenever I am having a stressful day in lab.

Brian Krueger, PhD
Columbia University Medical Center
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That's exactly why I love having a lab tank. The waterfall sound and fishy ecosystem are so relaxing. It's Zen like after a stressful day.

Prabodh Kandala
Texas Tech University Health Science Center
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Genomic Repairman
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Julie is right we demand a LabSpaces fish streaming webcam!

Brian Krueger, PhD
Columbia University Medical Center
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I would, but the fuck sticks at this University change my IP address everyday.

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Pretty.. :)

David Manly
Freelance Science Journalist
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I want! And I say this as a man with a serious allergy to fish, so, it means something :)
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